PPDB

PPDB	The Plant Proteome Database

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AT5G02830.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid nucleoid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G09900.1 11 Arabidopsis thaliana 3E-30 455 24 44 2 (2) _
AT5G42310.1 11 Arabidopsis thaliana 8E-29 439 24 45 96 (83) M
AT2G18940.1 11 Arabidopsis thaliana 2E-28 433 26 44 8 (4) C
Os03g17634.1 7 Oryza sativa 0 807 43 60 0 (0) C
Os04g41140.1 7 Oryza sativa 2E-30 423 27 40 0 (0) M
Os02g35750.1 7 Oryza sativa 3E-30 428 26 45 0 (0) C
Zm00001eb397200_P003 agpv5 Zea mays 0 787 43 62 0 (0) C
GRMZM2G092123_P01 3.21 Zea mays 2E-137 504 47 62 14 (14) _
GRMZM2G092123_P02 3.21 Zea mays 2E-137 504 47 62 14 (14) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Mtf2(3) PPR(10) PPR_1(9) PPR_2(11) PPR_3(8) PPR_long(4) RPM2(2)
TargetP:	Chloroplast (Class 2 C0.852; M0.155; S0.001; _0.079)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	852 aa (-cTP 827) (-lTP 744)
Molecular Weight	95.22 kDA(-cTP 92.27)(-lTP 83.35)
PI	7.69(-cTP 7.22)(-lTP 7.734)

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data