PPDB

The Plant Proteome Database

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AT5G02430.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. WD-40 repeat protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G37670.2 11Arabidopsis thaliana093459720 (0)_
AT2G37670.1 11Arabidopsis thaliana0934597218 (18)_
AT3G15470.1 11Arabidopsis thaliana7E-17487139550 (0)_
Os02g42590.1 7Oryza sativa2E-15075939550 (0)_
Os11g08400.1 7Oryza sativa1E-14672441560 (0)_
Os04g58180.1 7Oryza sativa8E-14566939560 (0)_
Zm00001eb408270_P002 agpv5Zea mays3E-16285739520 (0)_
GRMZM2G319435_P01 3.21Zea mays2E-16185839520 (0)_
v1_GRMZM2G319435_P01 4a53Zea mays2E-16185839520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(3) BBS2_Mid(3) Nup160(2) WD40(6) WD40_like(2)
TargetP: Cytoplasm (Class 2 C0.053; M0.201; S0.030; _0.900)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 905 aa (-cTP 889)
Molecular Weight 99.89 kDA(-cTP )
PI 7.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2315Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2321Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help