PPDB

PPDB	The Plant Proteome Database

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AT5G02330.1 Cysteine/Histidine-rich C1 domain family protein

Lab Annot.

DC1 domain-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G02350.1 11 Arabidopsis thaliana 0 655 78 87 0 (0) _
AT2G13900.1 11 Arabidopsis thaliana 0 659 79 87 0 (0) _
AT5G02340.1 11 Arabidopsis thaliana 0 664 63 74 0 (0) _
Zm00001eb102060_P001 agpv5 Zea mays 9E-09 190 30 43 0 (0) _
AC230021.2_FGP002 3.21 Zea mays 9E-09 190 30 43 0 (0) _
v1_AC230021.2_FGP002 4a53 Zea mays 9E-09 190 30 43 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_1(8) C1_2(8) ING(1) PHD(7) zf-GRF(2) Zn_ribbon_17(7)
TargetP:	Cytoplasm (Class 2 C0.068; M0.191; S0.121; _0.838)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	656 aa (-cTP 622)
Molecular Weight	75.85 kDA(-cTP )
PI	5.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19423572(stroma chloroplast (wt and clpr2-1))
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data

Expr*	Source	Tech.	Spot	PepSeq	ChargeState(z)	AreaRatio	Ambiguity	Tissue	Sample from
180_181	clpr2-1 cICAT - exp1 / wt cICAT - exp1	cICAT	2	QASLLCDVCSLIK + ICAT_h / QASLLCDVCSLIK + ICAT_h	2	1.97		leaf [A. thaliana]	chloroplast stroma