PPDB

The Plant Proteome Database

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AT5G02280.1   SNARE-like superfamily protein

Lab Annot. SNARE-like protein
Mapman: 29.3.99 protein.targeting.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G51160.1 11Arabidopsis thaliana1E-13143294626 (16)_
AT1G51160.3 11Arabidopsis thaliana1E-1314329460 (0)_
AT1G51160.2 11Arabidopsis thaliana1E-13143294626 (16)_
Os06g05804.1 7Oryza sativa3E-8114077875 (5)_
Os06g05804.2 7Oryza sativa3E-8114077873 (3)_
Os06g05804.3 7Oryza sativa3E-8114077873 (3)_
GRMZM2G005339_P01 3.21Zea mays8E-84141798948 (46)_
Zm00001eb376880_P001 agpv5Zea mays8E-8414179890 (0)_
Zm00001eb376880_P003 agpv5Zea mays8E-8414179890 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sedlin_N(1) Sybindin(1)
TargetP: Cytoplasm (Class 4 C0.095; M0.133; S0.189; _0.588)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 141 aa (-cTP 106)
Molecular Weight 16.01 kDA(-cTP )
PI 5.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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