PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G02230.1   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G02230.3 11Arabidopsis thaliana02801001000 (0)S
AT5G02230.2 11Arabidopsis thaliana02801001000 (0)_
AT5G59480.1 11Arabidopsis thaliana2E-11728056752 (1)_
Os03g16670.1 7Oryza sativa3E-12928364780 (0)_
Os01g74152.1 7Oryza sativa2E-11928156760 (0)_
Os03g61829.1 7Oryza sativa4E-9827852690 (0)_
Zm00001eb397730_P001 agpv5Zea mays2E-13828066800 (0)_
v1_GRMZM2G151992_P01 4a53Zea mays2E-13828066800 (0)_
GRMZM2G151992_P01 3.21Zea mays2E-13828066800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Acid_PPase(2) HAD_2(2) Hydrolase(3) Hydrolase_like(1)
TargetP: Cytoplasm (Class 2 C0.048; M0.139; S0.197; _0.826)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 280 aa (-cTP 250)
Molecular Weight 31.34 kDA(-cTP )
PI 5.61(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help