PPDB

 The Plant Proteome Database

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AT5G02130.1   Tetratricopeptide repeat (TPR)-like superfamily protein
Lab Annot.
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os05g38330.1 7Oryza sativa3E-9442942570 (0)M
Os05g38330.2 7Oryza sativa2E-5333638520 (0)M
GRMZM2G174370_P01 3.21Zea mays9E-9338644610 (0)M
v1_GRMZM2G174370_P01 4a53Zea mays9E-9338644610 (0)M
Zm00001eb351230_P002 agpv5Zea mays1E-9238644610 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4404(1) TOM20_plant(2) TPR_1(2) TPR_10(3) TPR_11(2) TPR_12(3) TPR_14(4) TPR_1
TargetP: Mitochondria (Class 2 C0.126; M0.858; S0.014; _0.048)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 420 aa (-cTP 417)
Molecular Weight 45.76 kDA(-cTP )
PI 6.30(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2308Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

 21311031(mitochondria)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help