PPDB

 The Plant Proteome Database

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AT5G01920.1   Protein kinase superfamily protein
Lab Annot. STN8 kinase state transition thylakoid
Mapman: 1.1.30 PS.lightreaction.state transition; 30.1.1 signalling.in sugar and nutrient physiology
Curated Location thylakoid-integral (Pubmed: 23198870 12624266 18431481 )

TAIR curated location: thylakoid15729347
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01920.2 11Arabidopsis thaliana04951001000 (0)C
AT1G68830.1 11Arabidopsis thaliana2E-884044260123 (118)C
AT1G12680.1 11Arabidopsis thaliana5E-0924327420 (0)_
Os05g40180.1 7Oryza sativa0401718635 (35)C
Os05g47560.1 7Oryza sativa5E-89405405626 (26)C
Os06g47880.1 7Oryza sativa3E-0919726460 (0)_
Zm00001eb290720_P004 agpv5Zea mays042070840 (0)M
Zm00001eb290720_P005 agpv5Zea mays041964760 (0)M
Zm00001eb290720_P001 agpv5Zea mays041971840 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: APH(1) FTA2(1) Kdo(1) Kinase-like(1) PK_Tyr_Ser-Thr(2) Pkinase(2) Pkinase_fungal
TargetP: Chloroplast (Class 1 C0.972; M0.021; S0.038; _0.089)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 495 aa (-cTP 446)
Molecular Weight 54.98 kDA(-cTP 49.94)
PI 9.43(-cTP 9.33)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
355Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1127Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1331Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1332Detail       leaf [A. thaliana] chloroplast thylakoid membraneshoot1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1627Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopeWild-type
1628Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopek1xk3
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1643Detail       leaf [A. thaliana] total leaf tissue Wild-type
1675Detail       Rosettes [A. thaliana]  
1676Detail       Rosettes [A. thaliana]  
1678Detail       Rosettes [A. thaliana]  
1707Detail        [A. thaliana] sht1
1708Detail        [A. thaliana] Wild-type
1713Detail       Rosettes [A. thaliana] Thylakoids thylakoid membranek1k3
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
1830Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1831Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Normal light
1832Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Normal light
1833Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1928Detail       Rosettes [A. thaliana] Thylakoids wild-type
1933Detail       leaf [A. thaliana] chloroplast wild-type
1934Detail       leaf [A. thaliana] chloroplast wild-type
1936Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1983Detail       leaf [A. thaliana] plastid wild-type
1984Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1986Detail       leaf [A. thaliana] plastid Prep1_Prep2
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
19995723(chloroplast reference proteome)

Comparative Proteomics Data

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