PPDB

PPDB	The Plant Proteome Database

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AT5G01880.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G10910.1 11 Arabidopsis thaliana 8E-51 161 53 62 0 (0) _
AT5G05280.1 11 Arabidopsis thaliana 5E-48 161 52 64 0 (0) _
AT1G49230.1 11 Arabidopsis thaliana 1E-42 156 47 62 0 (0) _
Os11g02424.1 7 Oryza sativa 4E-48 136 55 72 0 (0) C
Os12g02350.1 7 Oryza sativa 1E-45 128 56 73 0 (0) _
Os04g34230.1 7 Oryza sativa 8E-40 148 46 63 0 (0) C
GRMZM2G059110_P01 3.21 Zea mays 3E-41 162 46 59 0 (0) _
v1_GRMZM2G059110_P01 4a53 Zea mays 3E-41 162 46 59 0 (0) _
GRMZM2G467576_P01 3.21 Zea mays 5E-37 150 46 64 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_RING(1) FANCL_C(1) Jiraiya(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(
TargetP:	Cytoplasm (Class 1 C0.042; M0.034; S0.043; _0.986)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	159 aa (-cTP 103)
Molecular Weight	16.79 kDA(-cTP )
PI	6.37(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data