PPDB

PPDB	The Plant Proteome Database

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AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein

Lab Annot.

Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G27880.1 11 Arabidopsis thaliana 5E-16 207 31 40 0 (0) C
AT1G24625.1 11 Arabidopsis thaliana 1E-12 58 51 74 0 (0) _
AT5G25160.1 11 Arabidopsis thaliana 2E-11 51 54 78 0 (0) _
Os12g39220.1 7 Oryza sativa 1E-14 155 34 50 1 (1) _
Os08g44190.1 7 Oryza sativa 2E-13 91 40 54 0 (0) _
Os09g26100.1 7 Oryza sativa 3E-12 62 46 61 0 (0) _
Zm00001eb392100_P001 agpv5 Zea mays 8E-14 62 53 70 0 (0) _
v1_GRMZM2G345155_P01 4a53 Zea mays 8E-14 62 53 70 0 (0) _
GRMZM2G345155_P01 3.21 Zea mays 8E-14 62 53 70 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	zf-C2H2(1) zf-C2H2_3rep(1) zf-C2H2_4(1) zf-C2H2_6(1) zf-C2H2_jaz(1)
TargetP:	Chloroplast (Class 3 C0.899; M0.044; S0.028; _0.379)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	215 aa (-cTP 179)
Molecular Weight	24.05 kDA(-cTP 20.26)
PI	8.53(-cTP 8.64)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data