PPDB

PPDB	The Plant Proteome Database

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AT5G01800.1 saposin B domain-containing protein

Lab Annot.

saposin B domain-containing protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G51730.1 11 Arabidopsis thaliana 1E-51 170 47 65 30 (30) S
AT1G34460.4 11 Arabidopsis thaliana 5E-15 94 50 60 0 (0) S
AT1G34460.2 11 Arabidopsis thaliana 5E-15 94 50 60 0 (0) S
Os05g26954.1 7 Oryza sativa 2E-41 166 37 66 0 (0) C
Os05g26954.2 7 Oryza sativa 2E-41 166 37 66 0 (0) C
Os01g07250.1 7 Oryza sativa 1E-40 164 39 62 0 (0) S
GRMZM2G015906_P01 3.21 Zea mays 8E-41 187 34 61 1 (1) S
Zm00001eb350240_P002 agpv5 Zea mays 8E-41 187 34 61 0 (0) S
v1_GRMZM2G015906_P01 4a53 Zea mays 8E-41 187 34 61 1 (1) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF5743(1) Filo_VP35(1) Glycos_transf_1(2) HTH_Mga(3) Peptidase_S10(2) SapB_1(2)
TargetP:	Secreted (Class 1 C0.008; M0.055; S0.937; _0.053)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	217 aa (-cTP 187)
Molecular Weight	24.63 kDA(-cTP )
PI	5.79(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
19546170(mature pollen grains)
21173025(root proteome)

Comparative Proteomics Data