PPDB

 The Plant Proteome Database

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AT5G01720.1   RNI-like superfamily protein
Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G27920.1 11Arabidopsis thaliana2E-12463438600 (0)_
AT4G15475.1 11Arabidopsis thaliana3E-4444929480 (0)_
AT2G25490.1 11Arabidopsis thaliana1E-2644628460 (0)_
Os11g01780.1 7Oryza sativa065151700 (0)_
Os12g01760.1 7Oryza sativa065151700 (0)M
Os12g36670.1 7Oryza sativa1E-11863638580 (0)_
Zm00001eb094050_P001 agpv5Zea mays065651700 (0)M
Zm00001eb163310_P002 agpv5Zea mays065551700 (0)M
Zm00001eb163310_P001 agpv5Zea mays065550690 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: F-box-like(1) LRR_1(12) LRR_4(8) LRR_6(18) LRR_8(8)
TargetP: Secreted (Class 5 C0.036; M0.010; S0.624; _0.555)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 665 aa (-cTP 616)
Molecular Weight 72.27 kDA(-cTP )
PI 8.61(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 17660356(tonoplast (Brassica oleracea buds))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help