PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G01690.1   cation/H+ exchanger 27

Lab Annot. cation/H+ exchanger 27
Mapman: 34.12 transport.metal
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01680.1 11Arabidopsis thaliana076950680 (0)_
AT2G13620.1 11Arabidopsis thaliana2E-11078130520 (0)_
AT5G41610.1 11Arabidopsis thaliana3E-9579229500 (0)_
Os05g40650.1 7Oryza sativa1E-9978229500 (0)_
Os05g39600.1 7Oryza sativa1E-9779727490 (0)_
Os01g60140.1 7Oryza sativa2E-9579029480 (0)_
GRMZM2G037343_P01 3.21Zea mays6E-9679028492 (2)_
Zm00001eb291010_P001 agpv5Zea mays6E-9679028490 (0)_
v1_GRMZM2G037343_P01 4a53Zea mays6E-9679028492 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1132(1) DUF1435(2)
TargetP: Cytoplasm (Class 1 C0.025; M0.021; S0.092; _0.977)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 9 TMs
TAT position:
Length 767 aa (-cTP 698)
Molecular Weight 86.99 kDA(-cTP )
PI 8.74(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help