PPDB

 The Plant Proteome Database

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AT5G01670.1   NAD(P)-linked oxidoreductase superfamily protein
Lab Annot. NAD(P)-linked oxidoreductase protein
Mapman: 3.5 minor CHO metabolism.others
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01670.2 11Arabidopsis thaliana0349929217 (14)_
AT2G37770.2 11Arabidopsis thaliana2E-9031045637 (7)_
AT2G37790.1 11Arabidopsis thaliana1E-83316426314 (12)_
Os05g39690.1 7Oryza sativa3E-16431966820 (0)_
Os05g38230.2 7Oryza sativa2E-87314456226 (26)M
Os01g62870.1 7Oryza sativa2E-8431044610 (0)_
GRMZM2G169943_P01 3.21Zea mays8E-15332266810 (0)_
v1_GRMZM2G169943_P01 4a53Zea mays8E-15332266810 (0)_
Zm00001eb290330_P001 agpv5Zea mays8E-15332266810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Aldo_ket_red(1)
TargetP: Cytoplasm (Class 2 C0.153; M0.154; S0.094; _0.781)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 322 aa (-cTP 297)
Molecular Weight 36.58 kDA(-cTP )
PI 6.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2291Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
15908592(Carbonylated seed protein)
18599647(seed proteome)
18436743(specific to seeds)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help