PPDB

The Plant Proteome Database

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AT5G01590.1   histone-lysine N-methyltransferase ATXR3-like protein

Lab Annot. Tic56 (part of 1 Mda TIC complex)
Mapman: 29.3.3 protein.targeting.chloroplast
Curated Location envelope (Pubmed: 23198870 23372012 )

TAIR curated location: chloroplast envelope12775770
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes


Prediction
PFAM: GYF_2(2)
TargetP: Chloroplast (Class 3 C0.737; M0.085; S0.068; _0.234)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 527 aa (-cTP 479)
Molecular Weight 61.62 kDA(-cTP 56.25)
PI 5.50(-cTP 5.43)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type
1260Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 1) thylakoid membranewild-type
1262Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 2) thylakoid membranewild-type
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1535Detail       leaf [A. thaliana] wild-type
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1748Detail       leaf [A. thaliana] total leaf tissue Col_0
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1933Detail       leaf [A. thaliana] chloroplast wild-type
1934Detail       leaf [A. thaliana] chloroplast wild-type
1983Detail       leaf [A. thaliana] plastid wild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2238Detail       seedlings [A. thaliana] total tissue gfs9
2312Detail       leaf [A. thaliana] thylakoids thylakoid membrane 
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)
12766230(Total chloroplast envelope)
16618929(UNKNOWN-LOPIT-callus)
18463617(suspension cells-phosphorylated proteins)
18431481(chloroplast)
19995728(proplastid (Brassica napus))
19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)

Comparative Proteomics Data


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