PPDB

PPDB	The Plant Proteome Database

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AT5G01520.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G01520.2 11 Arabidopsis thaliana 4E-127 172 100 100 0 (0) _
AT3G47160.1 11 Arabidopsis thaliana 3E-117 228 67 81 0 (0) _
AT3G47160.2 11 Arabidopsis thaliana 9E-114 240 64 77 0 (0) _
Os07g46700.3 7 Oryza sativa 4E-119 228 69 82 0 (0) _
Os07g46700.2 7 Oryza sativa 3E-118 226 69 82 0 (0) _
Os07g46700.1 7 Oryza sativa 2E-117 232 68 80 0 (0) _
Zm00001eb433880_P001 agpv5 Zea mays 2E-118 238 65 81 0 (0) _
GRMZM2G440259_P02 3.21 Zea mays 2E-118 238 65 81 0 (0) _
Zm00001eb044410_P001 agpv5 Zea mays 3E-118 231 66 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(1) Prok-RING_4(1) zf-ANAPC11(2) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C
TargetP:	Cytoplasm (Class 4 C0.031; M0.060; S0.412; _0.788)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	242 aa (-cTP 220)
Molecular Weight	28.05 kDA(-cTP )
PI	8.45(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data