PPDB

PPDB	The Plant Proteome Database

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AT5G01450.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G38185.1 11 Arabidopsis thaliana 1E-97 385 41 60 0 (0) _
AT2G38185.2 11 Arabidopsis thaliana 1E-97 385 41 60 0 (0) _
AT2G38185.4 11 Arabidopsis thaliana 7E-96 391 40 59 0 (0) _
Os05g44550.1 7 Oryza sativa 6E-31 308 29 46 0 (0) S
Os06g14200.1 7 Oryza sativa 4E-13 151 31 48 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF4792(2) DUF4793(1) DZR(2) Prok-RING_4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-RING_
TargetP:	Cytoplasm (Class 5 C0.546; M0.074; S0.031; _0.647)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	2 TMs
TAT position:
Length	444 aa (-cTP 426)
Molecular Weight	49.28 kDA(-cTP )
PI	5.19(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data