PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G01390.1   DNAJ heat shock family protein

Lab Annot. J-domain protein DjB1 (type 2) (also AtSis1)
Mapman: 26.29* misc.DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G08910.1 11Arabidopsis thaliana033782892 (1)_
AT5G01390.2 11Arabidopsis thaliana5E-17433577773 (2)_
AT2G20560.1 11Arabidopsis thaliana7E-16333868815 (5)_
Os05g48810.1 7Oryza sativa6E-14836260730 (0)_
Os02g20394.1 7Oryza sativa7E-14635066782 (2)_
Os01g13760.1 7Oryza sativa3E-13735261750 (0)_
Zm00001eb343630_P001 agpv5Zea mays9E-15835366770 (0)_
GRMZM2G119316_P02 3.21Zea mays3E-15635366770 (0)M
v1_GRMZM2G119316_P02 4a53Zea mays3E-15635366770 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DnaJ(1) DnaJ_C(1) RPT(1)
TargetP: Cytoplasm (Class 2 C0.068; M0.169; S0.098; _0.915)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 335 aa (-cTP 309)
Molecular Weight 36.97 kDA(-cTP )
PI 9.08(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help