PPDB

PPDB	The Plant Proteome Database

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AT5G01160.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G01160.2 11 Arabidopsis thaliana 0 360 100 100 0 (0) _
Os10g35190.1 7 Oryza sativa 3E-65 349 40 54 3 (3) _
v1_GRMZM2G120933_P01 4a53 Zea mays 9E-72 343 45 56 6 (6) _
Zm00001eb221140_P002 agpv5 Zea mays 9E-72 343 45 56 0 (0) _
GRMZM2G120933_P01 3.21 Zea mays 9E-72 343 45 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_4(1) zf-C3HC4(2) zf-RING_5(1) zf-RING_UBOX(1) zf_Hakai(1)
TargetP:	Cytoplasm (Class 5 C0.283; M0.300; S0.020; _0.402)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	360 aa (-cTP 324)
Molecular Weight	39.77 kDA(-cTP )
PI	6.46(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data