PPDB

PPDB	The Plant Proteome Database

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AT4G40070.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G05200.1 11 Arabidopsis thaliana 3E-54 275 40 55 1 (1) S
AT5G27420.1 11 Arabidopsis thaliana 7E-46 275 38 53 0 (0) S
AT1G72200.1 11 Arabidopsis thaliana 5E-40 233 36 54 0 (0) _
Os09g29310.1 7 Oryza sativa 2E-43 268 38 51 0 (0) S
Os02g52210.2 7 Oryza sativa 1E-35 319 32 45 0 (0) M
Os02g52210.1 7 Oryza sativa 1E-35 319 32 45 0 (0) M
GRMZM2G082653_P01 3.21 Zea mays 3E-50 275 39 49 1 (1) _
Zm00001eb315600_P001 agpv5 Zea mays 3E-50 275 39 49 0 (0) _
v1_GRMZM2G082653_P01 4a53 Zea mays 3E-50 275 39 49 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arc(2) Baculo_RING(1) DUF4171(1) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1)
TargetP:	Mitochondria (Class 5 C0.077; M0.139; S0.070; _0.116)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:
TAT position:
Length	323 aa (-cTP 251)
Molecular Weight	36.07 kDA(-cTP )
PI	8.95(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data