PPDB

PPDB	The Plant Proteome Database

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AT4G39952.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G03580.1 11 Arabidopsis thaliana 4E-129 756 32 54 0 (0) C
AT1G69350.1 11 Arabidopsis thaliana 4E-128 735 33 54 0 (0) M
AT4G21300.1 11 Arabidopsis thaliana 2E-122 769 29 51 0 (0) C
Os04g38980.1 7 Oryza sativa 0 736 45 65 0 (0) C
Os03g56850.1 7 Oryza sativa 3E-129 740 30 54 0 (0) M
Os04g39410.1 7 Oryza sativa 2E-127 785 31 53 0 (0) M
Zm00001eb424400_P001 agpv5 Zea mays 0 745 46 65 0 (0) C
GRMZM2G135430_P01 3.21 Zea mays 0 745 46 65 0 (0) C
v1_GRMZM2G135430_P01 4a53 Zea mays 0 745 46 65 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(1) ChAPs(2) PPR(16) PPR_1(12) PPR_2(14) PPR_3(12) PPR_long(4) Ribonuc_red
TargetP:	Mitochondria (Class 2 C0.008; M0.787; S0.053; _0.051)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	775 aa (-cTP 754)
Molecular Weight	85.83 kDA(-cTP )
PI	6.20(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data