PPDB

PPDB	The Plant Proteome Database

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AT4G39870.1 TLD-domain containing nucleolar protein

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G39870.2 11 Arabidopsis thaliana 0 394 100 100 0 (0) _
AT2G05590.2 11 Arabidopsis thaliana 1E-64 175 57 73 0 (0) C
AT2G05590.1 11 Arabidopsis thaliana 2E-47 137 57 72 0 (0) C
Os02g51770.1 7 Oryza sativa 1E-107 391 48 62 0 (0) _
Os06g11790.1 7 Oryza sativa 5E-99 394 44 59 0 (0) _
Os02g51770.2 7 Oryza sativa 2E-93 194 68 82 0 (0) _
Zm00001eb194150_P003 agpv5 Zea mays 1E-105 396 47 61 0 (0) _
v1_GRMZM2G101518_P01 4a53 Zea mays 1E-105 396 47 61 0 (0) _
GRMZM2G101518_P01 3.21 Zea mays 1E-105 396 47 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DNA_pol_phi(1) DUF4611(1) eIF-3c_N(1) NOA36(1) PI3K_1B_p101(1) RR_TM4-6(1) SpoII
TargetP:	Cytoplasm (Class 4 C0.068; M0.207; S0.150; _0.418)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	394 aa (-cTP 363)
Molecular Weight	43.87 kDA(-cTP )
PI	4.91(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data