PPDB

PPDB	The Plant Proteome Database

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AT4G39850.1 peroxisomal ABC transporter 1

Lab Annot.

peroxisomal ABC transporter 1 (PAX1)
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems

Curated Location

peroxisome (Pubmed: 19794119 )

TAIR curated location: peroxisome12065405

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G39850.4 11 Arabidopsis thaliana 0 1337 100 100 0 (0) M
AT4G39850.2 11 Arabidopsis thaliana 0 1338 99 99 9 (9) M
AT4G39850.3 11 Arabidopsis thaliana 0 1352 98 98 9 (9) M
Os01g73530.2 7 Oryza sativa 0 1338 71 82 0 (0) M
Os01g73530.1 7 Oryza sativa 0 1265 73 84 0 (0) M
Os05g01700.1 7 Oryza sativa 0 1146 74 85 23 (23) _
v1_GRMZM2G375807_P01 4a53 Zea mays 0 974 69 82 0 (0) M
GRMZM2G375807_P01 3.21 Zea mays 0 974 69 82 0 (0) M
GRMZM2G074241_P01 3.21 Zea mays 0 367 72 83 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(2) AAA_15(2) AAA_16(2) AAA_18(2) AAA_21(2) AAA_22(2) AAA_23(2) AAA_24(2) AAA
TargetP:	Mitochondria (Class 1 C0.043; M0.926; S0.005; _0.096)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	4 TMs
TAT position:
Length	1337 aa (-cTP 1294)
Molecular Weight	149.57 kDA(-cTP )
PI	9.03(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19329564(peroxisomes (leaf))
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data