PPDB

The Plant Proteome Database

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AT4G39840.1   cell wall integrity/stress response component-like protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os09g20540.1 7Oryza sativa4E-5626539590 (0)S
Os08g31760.1 7Oryza sativa2E-5324141580 (0)S
v1_GRMZM2G440562_P01 4a53Zea mays2E-5623443601 (1)S
GRMZM2G440562_P01 3.21Zea mays2E-5623443601 (1)S
Zm00001eb001010_P001 agpv5Zea mays2E-5623443600 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Macoilin(1) RIFIN(1) SLC12(1) SOG2(1) Tmemb_cc2(1)
TargetP: Secreted (Class 3 C0.001; M0.222; S0.705; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 5 TMs
TAT position:
Length 451 aa (-cTP 421)
Molecular Weight 50.61 kDA(-cTP )
PI 9.71(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
19334764(plasma membrane (cell culture))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help