PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G39800.1   myo-inositol-1-phosphate synthase 1
Lab Annot. inositol-3-phosphate synthase isozyme 1 (IPS1) / myo-inositol-1-phosphat (MI-1-P) synthase 1
Mapman: 3.4.3 minor CHO metabolism.myo-inositol.InsP Synthases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G22240.1 11Arabidopsis thaliana051193974 (0)_
AT5G10170.1 11Arabidopsis thaliana0511899611 (11)_
AT2G22240.3 11Arabidopsis thaliana045193970 (0)_
Os03g09250.1 7Oryza sativa051186957 (7)_
Os10g22450.1 7Oryza sativa051181921 (1)_
Os03g09250.2 7Oryza sativa047386947 (7)_
v1_GRMZM2G155242_P01 4a53Zea mays0511869426 (26)_
Zm00001eb008360_P001 agpv5Zea mays051186940 (0)_
GRMZM2G155242_P01 3.21Zea mays0511869427 (27)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Inos-1-P_synth(2) NAD_binding_5(1)
TargetP: Cytoplasm (Class 2 C0.082; M0.078; S0.171; _0.896)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 511 aa (-cTP 432)
Molecular Weight 56.51 kDA(-cTP )
PI 5.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

 19452453(14-3-3-interacting proteins)
19546170(mature pollen grains)
20118269(developing seeds)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help