PPDB

The Plant Proteome Database

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AT4G39780.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G22200.1 11Arabidopsis thaliana5E-9626559670 (0)C
AT1G78080.1 11Arabidopsis thaliana2E-5826147590 (0)_
AT5G65130.1 11Arabidopsis thaliana2E-5828943550 (0)_
Os03g09170.1 7Oryza sativa3E-5430241510 (0)_
Os08g31580.1 7Oryza sativa2E-5024743550 (0)_
Os09g20350.1 7Oryza sativa1E-4921046590 (0)_
GRMZM2G029323_P01 3.21Zea mays7E-5932041520 (0)_
v1_GRMZM2G029323_P01 4a53Zea mays7E-5932041520 (0)_
Zm00001eb194220_P001 agpv5Zea mays7E-5932041520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1)
TargetP: Cytoplasm (Class 2 C0.132; M0.040; S0.037; _0.928)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 272 aa (-cTP 236)
Molecular Weight 30.95 kDA(-cTP )
PI 4.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help