PPDB

PPDB	The Plant Proteome Database

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AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

unknown protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G18420.1 11 Arabidopsis thaliana 2E-43 241 33 61 93 (72) C
AT3G53560.1 11 Arabidopsis thaliana 1E-39 208 34 62 203 (182) C
AT3G53560.2 11 Arabidopsis thaliana 3E-39 208 34 62 0 (0) M
Os05g08930.1 7 Oryza sativa 2E-73 219 48 75 0 (0) C
GRMZM5G847615_P01 3.21 Zea mays 1E-66 219 45 70 16 (16) C
Zm00001eb282930_P002 agpv5 Zea mays 1E-66 219 45 70 0 (0) C
v1_GRMZM2G089075_P01 4a53 Zea mays 1E-66 219 45 70 13 (13) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(2) BTAD(1) DUF4919(3) Fis1_TPR_C(3) HrpB1_HrpK(2) PknG_TPR(2) PPR(2) TPPI
TargetP:	Chloroplast (Class 3 C0.722; M0.166; S0.004; _0.080)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	341 aa (-cTP 292) (-lTP 237)
Molecular Weight	39.16 kDA(-cTP 33.39)(-lTP 27.57)
PI	8.93(-cTP 6.31)(-lTP 5.714)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))

Comparative Proteomics Data