PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G39280.1 phenylalanyl-tRNA synthetase%2C putative / phenylalanine-tRNA ligase

Lab Annot.

phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative
Mapman: 29.1.20 protein.aa activation.phenylalanine-tRNA ligase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G39280.2 11 Arabidopsis thaliana 0 485 99 100 12 (5) _
AT3G58140.1 11 Arabidopsis thaliana 1E-09 168 30 46 406 (299) C
Os10g26130.1 7 Oryza sativa 0 493 66 80 9 (9) _
Os10g26130.2 7 Oryza sativa 0 458 65 79 9 (9) _
Os10g26130.3 7 Oryza sativa 1E-161 394 61 76 9 (9) _
v1_GRMZM2G101463_P01 4a53 Zea mays 0 492 65 79 11 (11) _
Zm00001eb255720_P001 agpv5 Zea mays 0 492 65 79 0 (0) _
GRMZM2G101463_P01 3.21 Zea mays 0 492 65 79 10 (10) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PheRS_DBD1(1) PheRS_DBD2(1) PheRS_DBD3(1) tRNA-synt_2(2) tRNA-synt_2b(1) tRNA-sy
TargetP:	Cytoplasm (Class 2 C0.130; M0.085; S0.128; _0.886)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	485 aa (-cTP 468)
Molecular Weight	55.79 kDA(-cTP )
PI	8.40(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
311	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-his6
1202	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1208	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
2250	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19546170(mature pollen grains)
20118269(developing seeds)
19816138(rosette leaves)
19114538(guard cells Arabidopsis leaf)
21693672(wound-regulated leaf proteome (wt))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data