PPDB

PPDB	The Plant Proteome Database

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AT4G39140.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G39140.5 11 Arabidopsis thaliana 0 429 100 100 0 (0) C
AT4G39140.4 11 Arabidopsis thaliana 0 429 100 100 0 (0) C
AT4G39140.3 11 Arabidopsis thaliana 0 429 100 100 0 (0) C
Os01g15630.1 7 Oryza sativa 5E-49 455 33 50 0 (0) C
Os01g15630.2 7 Oryza sativa 1E-47 455 33 50 0 (0) C
Os03g20980.1 7 Oryza sativa 3E-14 102 39 55 0 (0) _
GRMZM2G064580_P04 3.21 Zea mays 2E-42 459 31 47 0 (0) C
GRMZM2G064580_P02 3.21 Zea mays 2E-42 459 31 47 0 (0) C
GRMZM2G064580_P01 3.21 Zea mays 2E-42 459 31 47 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CTU2(2) Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(2) zf-C3HC4_4(1) zf-
TargetP:	Chloroplast (Class 5 C0.506; M0.111; S0.008; _0.355)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	429 aa (-cTP 412)
Molecular Weight	47.55 kDA(-cTP 45.79)
PI	9.04(-cTP 9.05)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data