PPDB

The Plant Proteome Database

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AT4G39100.1   PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein

Lab Annot. Putative transcription factor containing a PHD finger and BAH motif
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
TAIR curated location: nucleus11129039
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G39100.2 11Arabidopsis thaliana1E-1221631001005 (0)M
AT4G22140.2 11Arabidopsis thaliana5E-9821263763 (1)_
AT4G22140.1 11Arabidopsis thaliana9E-9720863760 (0)_
Os07g08880.2 7Oryza sativa7E-10321464790 (0)_
Os07g08880.1 7Oryza sativa5E-10221563800 (0)_
Os09g21770.1 7Oryza sativa4E-9821464760 (0)_
GRMZM2G097726_P02 3.21Zea mays2E-10021362790 (0)_
Zm00001eb302190_P001 agpv5Zea mays2E-10021362790 (0)_
v1_GRMZM2G097726_P02 4a53Zea mays2E-100213627914 (14)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BAH(2) PHD(1) PHD_2(1) zf-CW(2)
TargetP: Mitochondria (Class 5 C0.197; M0.368; S0.042; _0.326)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 228 aa (-cTP 196)
Molecular Weight 26.12 kDA(-cTP )
PI 8.49(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help