PPDB

The Plant Proteome Database

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AT4G38990.1   glycosyl hydrolase 9B16

Lab Annot. glycosyl hydrolase family 9 protein
Mapman: 10.6.1 cell wall.degradation.cellulases and beta -1,4-glucanases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38990.2 11Arabidopsis thaliana037293930 (0)S
AT4G39000.1 11Arabidopsis thaliana2E-17435872814 (4)S
AT4G39010.2 11Arabidopsis thaliana1E-15833863760 (0)S
Os09g36060.1 7Oryza sativa1E-11634151660 (0)M
Os06g14540.1 7Oryza sativa2E-10436947610 (0)S
Os01g21070.1 7Oryza sativa2E-10433550640 (0)S
Zm00001eb319480_P002 agpv5Zea mays3E-11634052670 (0)M
GRMZM2G048165_P01 3.21Zea mays6E-11136349630 (0)M
v1_GRMZM2G331566_P02 4a53Zea mays7E-10437246610 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_9(1)
TargetP: Secreted (Class 1 C0.018; M0.013; S0.983; _0.046)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 347 aa (-cTP 283)
Molecular Weight 38.90 kDA(-cTP )
PI 5.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1935Detail       leaf [A. thaliana] chloroplast wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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