PPDB

The Plant Proteome Database

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AT4G38910.1   basic pentacysteine 5

Lab Annot. basic pentacysteine 5
Mapman: 27.3.99 RNA.regulation of transcription.unclassified
Curated Location
TAIR curated location: nucleus14731261
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38910.2 11Arabidopsis thaliana02581001001 (1)_
AT2G21240.2 11Arabidopsis thaliana2E-13426472820 (0)_
AT2G21240.1 11Arabidopsis thaliana2E-13426472820 (0)_
Os06g04010.1 7Oryza sativa7E-7230641570 (0)_
Os06g04010.2 7Oryza sativa7E-7230641570 (0)_
Os10g02584.3 7Oryza sativa3E-3910153770 (0)_
GRMZM2G118690_P01 3.21Zea mays2E-7030739570 (0)_
GRMZM2G118690_P02 3.21Zea mays2E-7030739570 (0)_
Zm00001eb378270_P001 agpv5Zea mays2E-7030739570 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: GAGA_bind(1) RNase_Y_N(1)
TargetP: Cytoplasm (Class 3 C0.019; M0.127; S0.194; _0.763)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 258 aa (-cTP 224)
Molecular Weight 28.92 kDA(-cTP )
PI 9.54(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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