PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G38890.1 FMN-linked oxidoreductases superfamily protein

Lab Annot.

dihydrouridine synthase protein
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G49640.4 11 Arabidopsis thaliana 3E-24 289 29 45 0 (0) S
AT3G49640.1 11 Arabidopsis thaliana 1E-23 289 29 45 0 (0) S
AT3G49640.3 11 Arabidopsis thaliana 9E-19 227 29 44 0 (0) S
Os04g02730.1 7 Oryza sativa 0 647 60 74 0 (0) C
Os04g44890.1 7 Oryza sativa 1E-24 303 28 45 0 (0) S
Os04g44890.2 7 Oryza sativa 1E-24 303 28 45 0 (0) S
GRMZM2G120740_P03 3.21 Zea mays 0 673 61 75 3 (3) _
Zm00001eb419910_P001 agpv5 Zea mays 0 673 61 75 0 (0) _
v1_GRMZM2G173792_P01 4a53 Zea mays 0 496 67 79 2 (2) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Dus(1) zf-CCCH(2) zf-CCCH_2(2) zf-CCCH_4(2) zf_CCCH_4(2)
TargetP:	Cytoplasm (Class 2 C0.072; M0.108; S0.059; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	691 aa (-cTP 613)
Molecular Weight	77.57 kDA(-cTP )
PI	6.10(-cTP )

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

14760709(Vacuolar proteome)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
20813957(SUMO proteome)

Comparative Proteomics Data