PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G38840.1   SAUR-like auxin-responsive protein family

Lab Annot.
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G21210.1 11Arabidopsis thaliana1E-4410071820 (0)M
AT2G21210.2 11Arabidopsis thaliana6E-4410071820 (0)_
AT5G18020.1 11Arabidopsis thaliana1E-358662810 (0)M
Os08g02520.1 7Oryza sativa1E-205964770 (0)M
Os08g02530.1 7Oryza sativa2E-206860690 (0)M
Os02g24740.1 7Oryza sativa2E-195961770 (0)M
Zm00001eb227020_P001 agpv5Zea mays2E-228447650 (0)M
v1_GRMZM2G330012_P01 4a53Zea mays2E-228447650 (0)M
GRMZM2G330012_P01 3.21Zea mays2E-228447650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Auxin_inducible(1) DUF1246(1) DUF3396(1)
TargetP: Mitochondria (Class 4 C0.524; M0.767; S0.009; _0.022)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 99 aa (-cTP 76)
Molecular Weight 11.11 kDA(-cTP )
PI 6.56(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

15060130(Plasma Membrane proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help