PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT4G38790.1 ER lumen protein retaining receptor family protein

Lab Annot.

Mapman: 29.3.4.1 protein.targeting.secretory pathway.ER

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G21190.1 11 Arabidopsis thaliana 0 268 90 94 0 (0) _
AT1G75760.1 11 Arabidopsis thaliana 4E-170 273 83 91 0 (0) M
AT1G19970.1 11 Arabidopsis thaliana 9E-166 273 80 89 0 (0) _
Os08g43470.1 7 Oryza sativa 7E-174 269 85 92 8 (8) M
Os09g36370.1 7 Oryza sativa 1E-165 260 86 93 4 (4) S
Os08g43470.2 7 Oryza sativa 2E-130 221 80 89 4 (4) M
v1_GRMZM2G138881_P01 4a53 Zea mays 1E-173 273 83 91 6 (6) M
Zm00001eb202690_P001 agpv5 Zea mays 1E-173 273 83 91 0 (0) M
GRMZM2G138881_P01 3.21 Zea mays 1E-173 273 83 91 13 (12) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	EII-Sor(4) ER_lumen_recept(1) PQ-loop(3)
TargetP:	Mitochondria (Class 4 C0.014; M0.759; S0.068; _0.472)
Predotar:
Subcel. Location:
TM-HMM prediction:	6 TMs
Aramemnon:	7 TMs
TAT position:
Length	273 aa (-cTP 271)
Molecular Weight	30.81 kDA(-cTP )
PI	9.14(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data