PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G38690.1   PLC-like phosphodiesterases superfamily protein

Lab Annot. 1-phosphatidylinositol phosphodiesterase-related
Mapman: 11.9.3 lipid metabolism.lipid degradation.lysophospholipases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G34920.1 11Arabidopsis thaliana7E-171318708367 (63)_
AT4G34930.1 11Arabidopsis thaliana3E-15031563800 (0)C
Os09g36520.1 7Oryza sativa7E-17431868830 (0)C
v1_GRMZM2G433847_P01 4a53Zea mays3E-16531966813 (3)M
GRMZM2G433847_P01 3.21Zea mays3E-16531966811 (0)M
Zm00001eb103680_P001 agpv5Zea mays3E-16531966810 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PI-PLC-X(1)
TargetP: Cytoplasm (Class 3 C0.026; M0.363; S0.061; _0.776)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 318 aa (-cTP 303)
Molecular Weight 36.29 kDA(-cTP )
PI 8.40(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help