PPDB

 The Plant Proteome Database

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AT4G38600.1   HECT ubiquitin protein ligase family protein KAK
Lab Annot. KAK (KAKTUS) (UPL3)
Mapman: 29.5.11.4.1 protein.degradation.ubiquitin.E3.HECT
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38600.3 11Arabidopsis thaliana018881001000 (0)C
AT4G38600.2 11Arabidopsis thaliana01815989823 (16)_
AT5G02880.1 11Arabidopsis thaliana7E-15968444590 (0)_
Os02g01170.1 7Oryza sativa0833677921 (21)_
Os05g38830.2 7Oryza sativa055552670 (0)_
Os05g38830.1 7Oryza sativa055552670 (0)_
Zm00001eb229270_P005 agpv5Zea mays0177763760 (0)C
Zm00001eb229270_P002 agpv5Zea mays0177763760 (0)C
Zm00001eb229270_P004 agpv5Zea mays0177763760 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Arm(4) HEAT(3) HEAT_EZ(2) HECT(1) UNC45-central(3)
TargetP: Chloroplast (Class 1 C0.968; M0.075; S0.000; _0.039)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1888 aa (-cTP 1822)
Molecular Weight 202.93 kDA(-cTP 196.22)
PI 5.82(-cTP 5.55)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1548Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1551Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1552Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1555Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1578Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2249Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help