PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G38440.1   RPAP1-like%2C carboxy-terminal protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os06g37640.1 7Oryza sativa01532395715 (15)M
v1_GRMZM2G156818_P01 4a53Zea mays0152440570 (0)C
GRMZM2G156818_P01 3.21Zea mays0152440573 (1)C
Zm00001eb385260_P001 agpv5Zea mays0152440570 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RPAP1_C(1) RPAP1_N(1)
TargetP: Chloroplast (Class 4 C0.832; M0.042; S0.009; _0.507)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1465 aa (-cTP 1415)
Molecular Weight 162.42 kDA(-cTP 157.12)
PI 6.08(-cTP 6.05)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1744Detail        [A. thaliana] Mep-6

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(cell cycle interactome (cell culture))
21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help