PPDB

The Plant Proteome Database

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AT4G38380.1   MATE efflux family protein

Lab Annot. MATE efflux protein-related
Mapman: 34.8 transport.metabolite transporters at the envelope membrane
Curated Location envelope-inner-integral (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38380.2 11Arabidopsis thaliana05601001000 (0)C
AT4G38380.5 11Arabidopsis thaliana056098980 (0)C
AT4G38380.3 11Arabidopsis thaliana04701001000 (0)S
Os09g37610.1 7Oryza sativa048959720 (0)_
Os02g58620.1 7Oryza sativa6E-129465506445 (45)_
Os12g01580.1 7Oryza sativa1E-11945147660 (0)C
Zm00001eb320990_P001 agpv5Zea mays045860750 (0)C
Zm00001eb130600_P001 agpv5Zea mays047758740 (0)C
Zm00001eb130600_P002 agpv5Zea mays045160770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: MatE(4) Polysacc_synt_C(2)
TargetP: Chloroplast (Class 3 C0.759; M0.252; S0.003; _0.058)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 9 TMs
Aramemnon: 13 TMs
TAT position:
Length 560 aa (-cTP 485)
Molecular Weight 59.82 kDA(-cTP 51.63)
PI 9.64(-cTP 9.17)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19995728(proplastid (Brassica napus))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help