PPDB

The Plant Proteome Database

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AT4G38200.1   SEC7-like guanine nucleotide exchange family protein

Lab Annot. unknown protein - Sec7 domain
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38200.2 11Arabidopsis thaliana012551001000 (0)C
AT4G35380.1 11Arabidopsis thaliana0171068823 (0)_
AT4G35380.2 11Arabidopsis thaliana0125768820 (0)M
Os03g14260.2 7Oryza sativa01450517039 (39)C
Os03g14260.1 7Oryza sativa01450517039 (39)C
Os07g37750.1 7Oryza sativa01381355445 (45)_
GRMZM2G058870_P01 3.21Zea mays01798476535 (35)C
Zm00001eb010810_P002 agpv5Zea mays0179847650 (0)C
v1_GRMZM2G058870_P01 4a53Zea mays01798476526 (25)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DCB(3) DUF1981(3) HEAT(2) Mon2_C(2) Sec7(1) Sec7_N(4)
TargetP: Cytoplasm (Class 4 C0.171; M0.254; S0.035; _0.580)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1687 aa (-cTP 1675)
Molecular Weight 187.54 kDA(-cTP )
PI 5.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
875Detail       leaf [A. thaliana] chloroplast stromawild-type
1985Detail       leaf [A. thaliana] plastid wild-type
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help