PPDB

PPDB	The Plant Proteome Database

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AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G38150.3 11 Arabidopsis thaliana 0 302 100 100 0 (0) C
AT4G38150.2 11 Arabidopsis thaliana 0 302 100 100 0 (0) C
AT5G03560.3 11 Arabidopsis thaliana 5E-34 261 32 54 0 (0) M
Os01g36600.1 7 Oryza sativa 2E-93 231 58 74 0 (0) M
Os06g20354.1 7 Oryza sativa 6E-35 169 37 60 0 (0) _
Os04g41140.1 7 Oryza sativa 9E-23 166 33 52 0 (0) M
GRMZM2G122344_P01 3.21 Zea mays 4E-88 249 52 69 0 (0) M
v1_GRMZM2G122344_P01 4a53 Zea mays 4E-88 249 52 69 0 (0) M
Zm00001eb342190_P001 agpv5 Zea mays 4E-88 249 52 69 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3368(3) HTH_56(1) PPR(5) PPR_1(4) PPR_2(4) PPR_3(3) PPR_long(2)
TargetP:	Chloroplast (Class 5 C0.376; M0.330; S0.033; _0.048)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	302 aa (-cTP 290)
Molecular Weight	33.45 kDA(-cTP 32.18)
PI	6.47(-cTP 5.93)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)

Comparative Proteomics Data