PPDB

The Plant Proteome Database

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AT4G38150.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38150.3 11Arabidopsis thaliana03021001000 (0)C
AT4G38150.2 11Arabidopsis thaliana03021001000 (0)C
AT5G03560.3 11Arabidopsis thaliana5E-3426132540 (0)M
Os01g36600.1 7Oryza sativa2E-9323158740 (0)M
Os06g20354.1 7Oryza sativa6E-3516937600 (0)_
Os04g41140.1 7Oryza sativa9E-2316633520 (0)M
GRMZM2G122344_P01 3.21Zea mays4E-8824952690 (0)M
v1_GRMZM2G122344_P01 4a53Zea mays4E-8824952690 (0)M
Zm00001eb342190_P001 agpv5Zea mays4E-8824952690 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3368(3) HTH_56(1) PPR(5) PPR_1(4) PPR_2(4) PPR_3(3) PPR_long(2)
TargetP: Chloroplast (Class 5 C0.376; M0.330; S0.033; _0.048)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 302 aa (-cTP 290)
Molecular Weight 33.45 kDA(-cTP 32.18)
PI 6.47(-cTP 5.93)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)

Comparative Proteomics Data


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