PPDB

 The Plant Proteome Database

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AT4G38090.1   ribosomal protein S5 domain protein
Lab Annot. unknown protein UPF0029 family
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G38090.4 10Arabidopsis thaliana6E-17023498980 (0)M
AT4G38090.2 11Arabidopsis thaliana2E-132183991001 (1)M
AT4G38090.3 11Arabidopsis thaliana2E-11816798991 (1)M
Os08g37310.1 7Oryza sativa5E-9119266810 (0)M
Os08g37310.2 7Oryza sativa3E-6914570840 (0)M
Zm00001eb038350_P001 agpv5Zea mays2E-9319566820 (0)M
Zm00001eb038350_P004 agpv5Zea mays2E-9319566820 (0)M
Zm00001eb038350_P002 agpv5Zea mays2E-9319566820 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF3747(1) UPF0029(1)
TargetP: Mitochondria (Class 4 C0.293; M0.596; S0.040; _0.071)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 234 aa (-cTP 210)
Molecular Weight 25.21 kDA(-cTP )
PI 8.68(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help