PPDB

 The Plant Proteome Database

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AT4G38010.1   Pentatricopeptide repeat (PPR-like) superfamily protein
Lab Annot. Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G22410.1 11Arabidopsis thaliana5E-12858236562 (2)M
AT2G29760.1 11Arabidopsis thaliana8E-12658536561 (0)C
AT1G08070.1 11Arabidopsis thaliana3E-12158138560 (0)C
Os04g41120.1 7Oryza sativa3E-16248848640 (0)M
Os10g26070.1 7Oryza sativa7E-11553436560 (0)M
Os01g60000.1 7Oryza sativa6E-10951736550 (0)M
v1_GRMZM2G094999_P01 4a53Zea mays9E-11758535550 (0)M
Zm00001eb223430_P001 agpv5Zea mays9E-11758535550 (0)M
GRMZM2G094999_P01 3.21Zea mays9E-11758535550 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ATP13(3) PPR(11) PPR_1(10) PPR_2(9) PPR_3(10) PPR_long(3)
TargetP: Cytoplasm (Class 4 C0.012; M0.190; S0.078; _0.459)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 559 aa (-cTP 476)
Molecular Weight 62.43 kDA(-cTP )
PI 8.52(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help