PPDB

 The Plant Proteome Database

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AT4G37980.2   cinnamyl alcohol dehydrogenase 7
Lab Annot. mannitol dehydrogenase, putative (ELI3-1)
Mapman: 16.2.1.10 secondary metabolism.phenylpropanoids.lignin biosynthesis.CAD
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G37980.1 11Arabidopsis thaliana02989798276 (183)_
AT4G37990.1 11Arabidopsis thaliana7E-163289839010 (10)_
AT4G39330.2 11Arabidopsis thaliana8E-1222875975344 (173)_
Os10g29470.1 7Oryza sativa3E-11528560765 (5)_
Os09g23530.1 7Oryza sativa6E-11328265760 (0)_
Os09g23540.1 7Oryza sativa3E-11228464760 (0)C
AC234163.1_FGP002 3.21Zea mays3E-11729262750 (0)_
Zm00001eb312060_P001 agpv5Zea mays3E-11729262750 (0)_
v1_AC234163.1_FGP002 4a53Zea mays3E-11729262750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: 2-Hacid_dh_C(1) 3HCDH_N(1) ADH_N(1) adh_short(2) ADH_zinc_N(1) AlaDh_PNT_C(1) DZ
TargetP: Cytoplasm (Class 2 C0.149; M0.078; S0.132; _0.787)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 298 aa (-cTP 246)
Molecular Weight 31.82 kDA(-cTP )
PI 6.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
310Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-TAPlong
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1208Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1874Detail       Total leaf [A. thaliana] total soluble wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
1876Detail       Total leaf [A. thaliana] total soluble wild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19423572(leaf (wt and clpr2-1))
22060019(phosphoproteome - N-starved seedlings)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help