PPDB

PPDB	The Plant Proteome Database

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AT4G37880.1 LisH/CRA/RING-U-box domains-containing protein

Lab Annot.

LisH/CRA/RING-U-box domains-containing protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G22690.2 11 Arabidopsis thaliana 0 392 68 82 0 (0) _
AT2G22690.1 11 Arabidopsis thaliana 0 392 68 82 0 (0) _
AT5G09630.1 11 Arabidopsis thaliana 1E-108 385 42 65 0 (0) _
Os06g38940.1 7 Oryza sativa 1E-145 389 52 70 5 (5) _
Os06g38940.2 7 Oryza sativa 1E-145 389 52 70 5 (5) _
Os05g06760.1 7 Oryza sativa 1E-29 286 25 49 0 (0) C
v1_GRMZM2G449083_P04 4a53 Zea mays 2E-147 393 54 70 17 (17) _
v1_GRMZM2G449083_P06 4a53 Zea mays 2E-147 393 54 70 17 (17) _
v1_GRMZM2G449083_P01 4a53 Zea mays 2E-147 393 54 70 17 (17) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CLTH(2) mTERF(1) Prok-RING_4(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-C3HC4
TargetP:	Cytoplasm (Class 2 C0.077; M0.119; S0.052; _0.877)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	388 aa (-cTP 376)
Molecular Weight	44.36 kDA(-cTP )
PI	6.29(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data