PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G37830.1   cytochrome c oxidase-like protein

Lab Annot. cytochrome c oxidase-related
Mapman: 9.7 mitochondrial electron transport / ATP synthesis.cytochrome c oxidase
Curated Location not plastid (supported by in-house exprements)

TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G37830.2 11Arabidopsis thaliana6E-6110290900 (0)M
AT4G37830.3 11Arabidopsis thaliana9E-487598980 (0)M
Os03g56190.1 7Oryza sativa5E-29102546727 (27)M
Zm00001eb058950_P001 agpv5Zea mays4E-329360680 (0)M
GRMZM2G177432_P01 3.21Zea mays3E-1667586218 (18)M

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: COX6A(1)
TargetP: Mitochondria (Class 4 C0.253; M0.481; S0.063; _0.076)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 102 aa (-cTP 86)
Molecular Weight 11.23 kDA(-cTP )
PI 9.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1357Detail       leaf [A. thaliana] total tissue - low mass region clpt1xclpt2
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1575Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1579Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1616Detail       Natural Senescence leaf [A. thaliana]  
2271Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
17660356(tonoplast (Brassica oleracea buds))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)
21988472(vacuole (unfiltered data))
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help