PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT4G37750.1   Integrase-type DNA-binding superfamily protein
Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
TAIR curated location: nucleus11058102
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G72570.1 11Arabidopsis thaliana7E-11939752640 (0)_
AT5G57390.2 11Arabidopsis thaliana9E-11322271820 (0)_
AT1G51190.1 11Arabidopsis thaliana4E-11219781900 (0)C
Os03g56050.1 7Oryza sativa2E-13841056630 (0)C
Os01g67410.1 7Oryza sativa2E-11225368770 (0)C
Os04g42570.1 7Oryza sativa7E-10919880880 (0)_
Zm00001eb399440_P002 agpv5Zea mays4E-13142453640 (0)C
Zm00001eb399440_P001 agpv5Zea mays2E-12942553640 (0)C
Zm00001eb299300_P002 agpv5Zea mays7E-12920688930 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AP2(2)
TargetP: Cytoplasm (Class 4 C0.362; M0.068; S0.009; _0.646)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 555 aa (-cTP 471)
Molecular Weight 61.72 kDA(-cTP )
PI 7.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help