PPDB

PPDB	The Plant Proteome Database

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AT4G37270.1 heavy metal atpase 1

Lab Annot.

Cu-ATPase, HMA1, also involved Zn detoxification
Mapman: 34.12 transport.metal

Curated Location

envelope (Pubmed: 23198870 16282320 19207208 18431481 ) (supported by in-house exprements)

TAIR curated location: chloroplast envelope16282320

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G30110.1 11 Arabidopsis thaliana 2E-56 621 27 48 0 (0) S
AT4G30110.2 11 Arabidopsis thaliana 2E-56 621 27 48 0 (0) S
AT5G21930.1 11 Arabidopsis thaliana 3E-53 569 30 48 13 (13) C
Os06g47550.1 7 Oryza sativa 0 713 70 82 0 (0) C
Os06g47550.2 7 Oryza sativa 0 566 68 80 0 (0) C
Os06g47550.4 7 Oryza sativa 0 566 68 80 0 (0) C
Zm00001eb226120_P003 agpv5 Zea mays 0 616 70 82 0 (0) S
Zm00001eb226120_P001 agpv5 Zea mays 0 705 69 82 0 (0) C
v1_GRMZM2G067853_P01 4a53 Zea mays 0 705 69 82 4 (4) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	E1-E2_ATPase(2) Hydrolase(1)
TargetP:	Mitochondria (Class 5 C0.659; M0.839; S0.002; _0.014)
Predotar:
Subcel. Location:
TM-HMM prediction:	5 TMs
Aramemnon:	6 TMs
TAT position:
Length	819 aa (-cTP 759)
Molecular Weight	88.19 kDA(-cTP )
PI	8.06(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
339	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
874	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
875	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1933	Detail								leaf [A. thaliana]	chloroplast	wild-type
1934	Detail								leaf [A. thaliana]	chloroplast	wild-type
1935	Detail								leaf [A. thaliana]	chloroplast	wild-type
1936	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1937	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1985	Detail								leaf [A. thaliana]	plastid	wild-type
1986	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
1988	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

12766230(Total chloroplast envelope)
18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21515685(GreenCut2)

Comparative Proteomics Data