PPDB

The Plant Proteome Database

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AT4G37210.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot. Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G37210.2 11Arabidopsis thaliana037510010014 (4)_
Os07g03070.1 7Oryza sativa3E-97430456014 (14)_
Zm00001eb117930_P001 agpv5Zea mays4E-9042645600 (0)_
v1_GRMZM2G103955_P02 4a53Zea mays4E-9042645604 (4)_
GRMZM2G103955_P02 3.21Zea mays4E-90426456050 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF357(1) Laminin_II(1) RPN7(2) SHNi-TPR(2) TPR_1(3) TPR_10(3) TPR_11(3) TPR_12(
TargetP: Cytoplasm (Class 4 C0.376; M0.041; S0.243; _0.615)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 492 aa (-cTP 485)
Molecular Weight 52.27 kDA(-cTP )
PI 4.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help