PPDB

The Plant Proteome Database

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AT4G37160.1   SKU5 similar 15

Lab Annot.
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G37160.2 11Arabidopsis thaliana04491001000 (0)S
AT2G23630.2 11Arabidopsis thaliana051880890 (0)S
AT2G23630.1 11Arabidopsis thaliana051880894 (4)S
Os07g02810.1 7Oryza sativa052058725 (5)S
Os07g32660.1 7Oryza sativa054952699 (9)S
Os06g46500.1 7Oryza sativa0523536910 (10)S
GRMZM2G076225_P03 3.21Zea mays052254695 (5)S
Zm00001eb322470_P001 agpv5Zea mays052254690 (0)S
v1_GRMZM2G076225_P03 4a53Zea mays052254693 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Cu-oxidase(3) Cu-oxidase_2(2) Cu-oxidase_3(1)
TargetP: Secreted (Class 1 C0.002; M0.049; S0.985; _0.037)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 541 aa (-cTP 477)
Molecular Weight 60.78 kDA(-cTP )
PI 9.41(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help