PPDB

The Plant Proteome Database

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AT4G37120.1   Pre-mRNA splicing Prp18-interacting factor

Lab Annot. Pre-mRNA splicing Prp18-interacting factor
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G65660.1 11Arabidopsis thaliana053489950 (0)_
AT3G45950.1 11Arabidopsis thaliana036674831 (1)_
Os08g03390.1 7Oryza sativa053476880 (0)_
Os08g03390.2 7Oryza sativa045279900 (0)_
Zm00001eb173350_P001 agpv5Zea mays053476880 (0)_
Zm00001eb261550_P001 agpv5Zea mays053476880 (0)_
GRMZM2G057026_P01 3.21Zea mays1E-17429977900 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Slu7(3) zf-CCHC_4(1)
TargetP: Cytoplasm (Class 2 C0.107; M0.184; S0.093; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 536 aa (-cTP 525)
Molecular Weight 62.06 kDA(-cTP )
PI 6.15(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1494Detail       leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help